Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015856211.1_cds_XP_016513070.1_25648
CDS Infomation

[gene=LOC107830103] [db_xref=GeneID:107830103] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016513070.1] [location=complement(46205..47719)] [gbkey=CDS]
Sequence

ATGGATAAACAATCTACTAAAGAAACAATGATTACTAGAGAAGAAGGTAGGTGCATTGGC
AATCATCAAGATGAATGGAACATTACAATTCAAGAGTCAAACTCAGATTCTCATGAAATA
AGTGAAAATGAGAGTCAATGGCTAAAGTCCTTAGAGAAGAGCAGAGGGTACCCAACCATT
GGCTCATCACAGAAGCCAAAGATATACATGGTCCCCAAAATGCATCGCGAGATTGAATCA
AATGTAAGGTGCTATGAGCCCCTTGTGGTTGCTCTCGGTCCATTTCACCATGGAAAATCC
AAGCTTCAACCTATGGAGAAGTACAAGGAGATGATGGCAATTGAGTTTGCTGATCAAGAA
AGCACCGAACCAAAATCTGCTGGGGTCTTATCACGGCTTTTAACGAATTCAGTGTCCATT
GATGAGCTTTACAAAAAGGTGAAGAACATTGTCCCTAATGTCAGGGAGTGTTATGCTCTA
GACTTAATCAAAGATTACAGCAATGAGGAGTTTGCACAGATGATGTTCCTGGATGGCTGT
TTCATCCTCCAATATATTCTCTGCCTTGTCACCGGCAATTATAAGCAGCTGCAAATGAAG
AGCCATGATATAGTTTTCATTCACCGTGATCTTTTTTTACTTGAAAATCAGTTACCTTTT
GAAGTCCTGCATGTGTTAATGAGCTGTAGGTTCAAGAAAGATGAAGGAATGAGGATGATT
AAAACATTCATCTCGAGTGCACATGCAAAGCCCCCTCGAAATCATGGATTAATTCAAAGT
ATCAAGGATTTCTTTCTAGATTTCTTTGGCAAGCATGAAGGAGAAGGGGCTTACCTGATC
AAAGAAGAAAATCCTGCTCATCTGCTCGAGATATTAAGAACGCAACTCATAGACCCAAAT
GTTTTCTCAGAAGGCGGATGCTATCTAAGGGGTGAGTGGTGCTCATATCGCTCAGCCATG
GAGCTCAAGAAAGCAGGAATATATTTCAGGCGTGGAAAGAGTCGTCGTCTTTCAGACATT
GAGTTCAATTCATTTCATTGCTCAGCTCTTTTAACACTTCCACCTATAACCATAGATGAT
TCAACCAAGTCGGAGCTATTAAACTTGGTTGCATATGAGGCATGCCCTGACACACCAGAT
GACTTTGGTATTACATCTTATCTTTGCTTCATGGATTCACTAATTGATCATGCTGAAGAT
GTGAAGGAGCTGAGATCAAAAGGTATACTACTTAACTTTCTTGGAAGTGACCAAGAAGTA
GCAGATCTCTTCAATGAAATAGCAACAGATTTGGTGCCTAATCCACATGCCTTTGTTGGT
GTGAAAGACAAAATTGAGAATCATTACAATAACAAAGGAAAAATATGGATTGCTGAGTGG
AAGAACACTCATTTTAATAACCCATGGACTATTTTTGCATTTATTGCCGCAATTTTTGTC
ATAGGTTTGGAAGTTACTGGTACAGGTTTATCAGGTATCCAAACCTACTTTGCAGTCCAT
CCAAAAGGCAGCTAG

Peptide Sequence

PEP ID

XP_016513070.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MDKQSTKETMITREEGRCIGNHQDEWNITIQESNSDSHEISENESQWLKSLEKSRGYPTI
GSSQKPKIYMVPKMHREIESNVRCYEPLVVALGPFHHGKSKLQPMEKYKEMMAIEFADQE
STEPKSAGVLSRLLTNSVSIDELYKKVKNIVPNVRECYALDLIKDYSNEEFAQMMFLDGC
FILQYILCLVTGNYKQLQMKSHDIVFIHRDLFLLENQLPFEVLHVLMSCRFKKDEGMRMI
KTFISSAHAKPPRNHGLIQSIKDFFLDFFGKHEGEGAYLIKEENPAHLLEILRTQLIDPN
VFSEGGCYLRGEWCSYRSAMELKKAGIYFRRGKSRRLSDIEFNSFHCSALLTLPPITIDD
STKSELLNLVAYEACPDTPDDFGITSYLCFMDSLIDHAEDVKELRSKGILLNFLGSDQEV
ADLFNEIATDLVPNPHAFVGVKDKIENHYNNKGKIWIAEWKNTHFNNPWTIFAFIAAIFV
IGLEVTGTGLSGIQTYFAVHPKGS

Transcript Sequence

Gene sequence data has not been registered.